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Epidemics and Information Diffusion (Simons Institute, 2022)

computational epidemiologists, statistical modelers, network scientists, public health researchers, data scientists, reinforcement learning researchers, policy makers

contact tracing models; K-neighborhood local estimators; graphon-coupled spatial SIR; simplicial complex random walks; reinforcement learning border testing; within-host to between-host coupling; dynamical survival analysis; Watts threshold cascades; data-augmented MCMC for SIR; contact process with avoidance; pool-testing badge frameworks; transmission neural networks

titleauthorlength
Epidemic Models with Manual and Digital Contact TracingTom Britton01h 14m
A Markovian stochastic SIR on a large, homogeneously mixing population uses infection rate β, recovery rate γ and diagnosis rate δ; manual tracing reaches each…
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Algorithms Using Local Graph Features to Predict EpidemicsYeganeh Alimohammadi52m
Claims a nonparametric local estimator that uses repeated K‑neighborhood contact tracing queries (constant K and constant number of queries) to estimate…
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Functional Law of Large Numbers and PDEs for Spatial Epidemic Models with...Etienne Pardoux01h 10m
Proves a functional law of large numbers for a non‑Markovian SIR model as both number of patches and individuals per patch → ∞, giving local‑uniform…
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Random Walks on Simplicial Complexes for Exploring NetworksViet Chi Tran01h 05m
Proposes a concrete chain-valued random walk on k‑simplices whose transitions use adjacent (k+1)-simplices so the generator = upward combinatorial Laplacian…
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Efficient and Targeted COVID-19 Border Testing via Reinforcement LearningHamsa Bastani01h 01m
Reinforcement learning system Eva deploys at 40 Greek entry points in summer 2020, combining passenger origin and two‑week rolling PCR results to allocate…
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Mathematics of the COVID-19 Pandemics: Lessons Learned and How to Mitigate the Next OneAbba Gumel01h 18m
Simple compartmental SEIR-style models with added pre-symptomatic and asymptomatic classes are fit to mortality data (not case counts) and show…
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The Effect of Restrictive Interactions between Susceptible and Infected Individuals...Shirshendu Chatterjee01h 06m
Rigorous analysis introduces a contact process with avoidance with infection rate λ and avoidance/deactivation rate α, using Harris-style graphical…
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Between-host, within-host Interactions in Simple Epidemiological ModelsJorge Velasco-Hernández57m
Links a Perelson-style within-host viral model to a simple SI between-host model through a logistic environmental reservoir, uses fast-slow separation and…
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Dynamical Survival Analysis: Survival Models for EpidemicGrzegorz Rempala01h 08m
Introduces dynamical survival analysis that replaces the random infectious pressure in a stochastic SIR with its law-of-large-numbers limit, using the Selke…
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Complex Contagions and Hybrid Phase TransitionsJoel Miller01h 08m
Adapts infectious-disease methods to produce closed-form dynamical equations for the Watts threshold model on configuration-model and triangle-based clustered…
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Testing, Voluntary Social Distancing, and the Spread of an InfectionAli Makhdoumi01h 04m
A game-theory model links individual social activity xi∈[0,1] to a random contact network (edge prob ∝ xi xj) and a discrete-time independent-cascade infection…
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Likelihood-based Inference for Stochastic Epidemic ModelsJason Xu01h 03m
Claims an exact likelihood route for continuous‑time stochastic SIR by treating missing event times as latent variables and exploring them with data-augmented…
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Bayesian Learning in Social NetworksIlan Lobel57m
Revisits the 2011 Review of Economic Studies model (with Acemoglu, Dahleh, Ozdaglar) where agents observe past actions through a stochastic network; proves a…
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Just a Few Seeds More: The Inflated Value of Network Data for Diffusion...Mohammad Akbarpour01h 04m
Shows that under the classic SIR/independent cascade model, seeding s + x random people often outperforms optimally chosen s seeds: simulations on 75 Indian…
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Learning through the Grapevine and the Impact of the Breadth and Depth of Social NetworksSuraj Malladi01h 07m
Model of noisy relay on directed trees with mutation rates mu01 and mu10 and dropout probability shows that message fidelity falls with distance and with…
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Diversity and Inequality in Information Diffusion on Social NetworksAna-Andreea Stoica54m
Uses a preferential attachment with unequal communities model plus estimated homophily to show when seeding for proportional representation also improves…
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A Global Comparison of COVID-19 Variant Waves and Relationships with Clinical and...Sara del Valle56m
Global analysis of 11.5 million sequences from GISAID using PANGO lineages fits a flexible multinomial model with cubic splines (better than linear fits) to…
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Spatial Spread of Dengue Virus: Appropriate Spatial Scales for TransmissionAlun L. Lloyd01h 13m
City-level dengue spread hinges on the household scale: Aedes aegypti disperses <100 m so human movement drives city spread; GPS traces from Iquitos (≈300,000…
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Transmission Neural Networks: From Virus Spread Models to Neural NetworksShuang Gao52m
A discrete-time virusspread model is rewritten by taking states S = −log(1−P) and becomes a linear summation through linkwise nonlinearities, leading to a new…
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