Niko Beerenwinkel
where else to find them
github:beerenwinkel
bluesky:bsse.ethz.ch
what they talk about
where they keep going back
no series more than once — all 2 in the filters
on a stage with
who talks about the same things
nobody close enough yet
| title | conference | date |
|---|---|---|
| Modeling Cancer Evolution from Genomic Data | Computational Cancer Biology 2016 | 2016-02-01 |
Single-cell phylogenies are reconstructed from noisy binary mutation matrices using an MCMC prune-and-regraft sampler that integrates out sample attachments… | ||
| Introduction to Cancer Bioinformatics I: Inferring Genomic Variation from Tumor Sequencing Data | Algorithmic Challenges in Genomics Boot Camp | 2016-01-19 |
Course argues cancer sequencing needs beta‑binomial overdispersion models to avoid thousands of false SNV calls, shows ultra‑deep control detecting variants… | ||
| Introduction to Cancer Bioinformatics II: Tumor Phylogeny | Algorithmic Challenges in Genomics Boot Camp | 2016-01-19 |
Describes reconstructing tumor trees under the infinite sites assumption using perfect phylogeny, factoring sample variant allele frequencies (VAFs) via U×B… | ||
| Introduction to Cancer Bioinformatics III: Cancer Progression Networks | Algorithmic Challenges in Genomics Boot Camp | 2016-01-19 |
Defines and fits explicit progression models: a restricted Bayesian network (oncogenetic tree) and its generalization (conjunctive Bayesian network) with one… | ||
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